PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_19613
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 64aa    MW: 7216.32 Da    PI: 9.8344
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_19613genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP237.56e-12957256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr...krfslgkfgtaeeAakaaiaarkklege 56
                 y+GVr+++ +g+WvA    p          +  l++f tae+Aa a++ a+ k++ge
  PEQU_19613  9 LYRGVRQRH-WGKWVAL---P-----PpkpHSCILNTFNTAEDAAMAYDTAAFKFHGE 57
                59******9.*******...8.....332467778*********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.44E-21864No hitNo description
SMARTSM003803.5E-13964IPR001471AP2/ERF domain
PfamPF008471.1E-7957IPR001471AP2/ERF domain
PROSITE profilePS5103215.83964IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-19964IPR001471AP2/ERF domain
SuperFamilySSF541715.17E-17964IPR016177DNA-binding domain
PRINTSPR003671.2E-111021IPR001471AP2/ERF domain
PRINTSPR003671.2E-114664IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 64 aa     Download sequence    Send to blast
PVTPPPTKLY RGVRQRHWGK WVALPPPKPH SCILNTFNTA EDAAMAYDTA AFKFHGELVN  60
LNFP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004953948.13e-19PREDICTED: ethylene-responsive transcription factor RAP2-4-like
RefseqXP_007221531.12e-20hypothetical protein PRUPE_ppa020676mg, partial
RefseqXP_010647272.13e-19PREDICTED: ethylene-responsive transcription factor RAP2-4-like isoform X2
SwissprotO656651e-18ERF60_ARATH; Ethylene-responsive transcription factor ERF060
SwissprotQ9SKT12e-18ERF53_ARATH; Ethylene-responsive transcription factor ERF053
TrEMBLM5XUF33e-20M5XUF3_PRUPE; Uncharacterized protein (Fragment)
STRINGVIT_00s0662g00030.t015e-19(Vitis vinifera)
STRINGSi017760m9e-19(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38235203
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.16e-12ERF family protein